Gilbertson RL, Batuman O, Webster CG, Adkins S. Role of the insect supervectors Bemisia tabaci and Frankliniella occidentalis in the emergence and global spread of plant viruses. Annu Rev Virol. 2015;2(1):67–93.
Webster CG, Frantz G, Reitz SR, Funderburk JE, Mellinger HC, McAvoy E, Turechek WW, Marshall SH, Tantiwanich Y, McGrath M, Daughtrey ML, Adkins S. Emergence of Groundnut ringspot virus and Tomato chlorotic spot virus in vegetables in Florida and the southeastern United States. Phytopathology. 2015;105:3, 388–39
Feldhoff A, Kikkert M, Kormelink R, Krczal G, Goldbach R, Peters D. Serological comparison of tospoviruses with polyclonal antibodies produced against the main structural proteins of tomato spotted wilt virus. Adv Virol. 1997;142(4):781–93.
De Borbón CM, Gracia O, Piccolo R. Relationships between tospovirus incidence and thrips populations on tomato in Mendoza, Argentina. J Phytopathol. 2006;154:93–9.
De Avila A, De Haan P, Kormelink R, Resende RDO, Goldbach RW, Peters D. Classification of tospoviruses based on phylogeny of nucleoprotein gene sequences. J Gen Virol. 1993;74(2):153–9.
Gracia O, De Borbón CM, De Millan NG, Cuesta GV. Occurrence of different tospoviruses in vegetable crops in Argentina. J Phytopathol. 1999;147(4):223–7.
Londoño A, Capobianco H, Zhang S, Polston JE. First record of Tomato chlorotic spot virus in the USA. Trop Plant Pathol. 2012;37(5):333–8.
Zhang S, Seal DR, Wang Q, McAvoy E, Polston JE. An outbreak of tomato chlorotic spot virus, an emerging tospovirus threatening tomato production in the United States. Phytopathology. 2015;105:4, S4.156.
Webster CG, Perry KL, Lu X, Horsman L, Frantz G, Mellinger C, Adkins S. First report of Groundnut ringspot virus infecting tomato in south Florida. Plant Health Progress. 2010;11(1):49.
Batuman O, Rojas MR, Almanzar A, Gilbertson RL. First report of Tomato chlorotic spot virus in processing tomatoes in the Dominican Republic. Plant Dis. 2014;98(2):286–286.
Baysal-Gurel F, Li R, Ling KS, Miller SA. First report of Tomato chlorotic spot virus infecting tomatoes in Ohio. Plant Dis. 2015;99(1):163–163.
Martínez ZY, Chang SL, González AH, Barboza VNM, González AG. First molecular evidence of Tomato chlorotic spot virus infecting tomatoes in Cuba. Plant Dis. 2016;100(9):1956–1956.
Sui X, McGrath MT, Zhang S, Wu Z, Ling KS. First report of tomato chlorotic spot virus infecting tomato in New York. Plant Dis. 2018;102(2):460–460.
Webster CG, de Jensen CE, Rivera-Vargas LI. Rodrigues JCV, Mercado W, Frantz G, Mellinger C, Adkins S. First report of Tomato chlorotic spot virus (TCSV) in tomato, pepper, and jimsonweed in Puerto Rico. Plant Health Progress. 2013;14:1, 47.
Batuman O, Turini TA, LeStrange M, Stoddard S, Miyao G, Aegerter BJ, Chen L-F, McRoberts N, Ullman DE, Gilbertson RL. Development of an IPM Strategy for Thrips and Tomato spotted wilt virus in Processing Tomatoes in the Central Valley of California. Pathogens. 2020;9:8, 636.
Cho JJ, Mau R, German TL, Martmann R, Yudin LS. A multidisciplinary approach to management of tomato spotted wilt virus in Hawaii. Plant Dis. 1989;73(5):375–83.
Riley DG, Pappu HR. Tactics for management of thrips (Thysanoptera: Thripidae) and tomato spotted wilt virus in tomato. J Econ Entomol. 2004;97(5):1648–58.
Sui X, Zhang S, Wu Z, Ling KS. Reverse transcription loop-mediated isothermal amplification for species-specific detection of tomato chlorotic spot orthotospovirus. J Virol Methods. 2018;253:56–60.
Yilmaz S, Adkins S, Batuman O. Field-portable, rapid, and low-cost RT-LAMP assay for the detection of tomato chlorotic spot Virus. Phytopathology®, 2023; 113:3, 567–76.
Babu B, Ochoa-Corona FM, Paret ML. Recombinase polymerase amplification applied to plant virus detection and potential implications. Anal Biochem. 2018;546:72–7.
Strayer-Scherer A, Jones JB, Paret ML. “Recombinase polymerase amplification assay for field detection of tomato bacterial spot pathogens. Phytopathology. 2015;109(4):690–700.
Lee HJ, Cho IS, Ju HJ, Jeong RD. Rapid and visual detection of tomato spotted wilt virus using recombinase polymerase amplification combined with lateral flow strips. Mol Cell Probes. 2021;57:101727.
Zhou Y, Zheng HY, Jiang DM, Liu M, Zhang W, Yan JY. A rapid detection of tomato yellow leaf curl virus using recombinase polymerase amplification-lateral flow dipstick assay. Lett Appl Microbiol. 2022;74(5):640–6.
Lillis L, Siverson J, Lee A, Cantera J, Parker M, Piepenburg O, Lehman DA, Boyle DS. Factors influencing Recombinase polymerase amplification (RPA) assay outcomes at point of care. Mol Cell Probes. 2016;30(2):74–8.
Lobato IM, O’Sullivan CK. Recombinase polymerase amplification: Basics, applications and recent advances. TrAC Trends Anal Chem. 2018;98:19–35.
Piepenburg O, Williams CH, Stemple DL, Armes NA. DNA detection using recombination proteins. PLoS Biol. 2016;4(7):e204.
Silva G, Bömer M, Nkere C, Kumar PL, Seal SE. Rapid and specific detection of Yam mosaic virus by reverse-transcription recombinase polymerase amplification. J Virol Methods. 2015;222:138–44.
Li H, Zhang L, Yu Y, Ai T, Zhang Y, Su J. Rapid detection of Edwardsiella ictaluri in yellow catfish (Pelteobagrus fulvidraco) by real-time RPA and RPA-LFD. Aquaculture. 2022;552:737976.
Yang Y, Qin X, Zhang W, Li Y, Zhang Z. Rapid and specific detection of porcine parvovirus by isothermal recombinase polymerase amplification assays. Mol Cell Probes. 2016;30(5):300–5.
Harrison L, Brame KL, Geltz LE, Landry AM. Closely opposed apurinic/apyrimidinic sites are converted to double strand breaks in Escherichia coli even in the absence of exonuclease III, endonuclease IV, nucleotide excision repair and AP lyase cleavage. DNA Repair. 2006;5(3):324–35.
Hou P, Wang H, Zhao G, He C, He H. Rapid detection of infectious bovine Rhinotracheitis virus using recombinase polymerase amplification assays. BMC Vet Res. 2017;13(1):1–9.
Mandal B, Csinos AS, Martinez-Ochoa N, Pappu HR. A rapid and efficient inoculation method for Tomato spotted wilt tospovirus. J Virol Methods. 2008;149(1):195–8.
Mason MG, Botella JR. Rapid (30-second), equipment-free purification of nucleic acids using easy-to-make dipsticks. Nat Protoc. 2020;15(11):3663–77.
Badillo-Vargas IE, Baker CA, Turechek WW, Frantz G, Mellinger HC, Funderburk JE, Adkins S. Genomic and biological characterization of tomato necrotic streak virus, a novel subgroup 2 ilarvirus infecting tomato in Florida. Plant Disease. 2016;100:6, 1046–53.
Jacobi V, Bachand GD, Hamelin RC, Castello JD. Development of a multiplex immunocapture RT-PCR assay for detection and differentiation of tomato and tobacco mosaic tobamoviruses. J Virol Methods. 1998;74(2):167–78.
Jain RK, Pappu SS, Pappu HR, Culbreath AK, Todd JW. Molecular diagnosis of tomato spotted wilt tospovirus infection of peanut and other field and greenhouse crops. Plant Dis. 1998;82(8):900–4.
Ling KS, Tian T, Gurung S, Salati R, Gilliard A. First report of tomato brown rugose fruit virus infecting greenhouse tomato in the United States. Plant Dis. 2019;103(6):1439.
Mansilla C, Sánchez F, Ponz F. The diagnosis of the tomato variant of pepino mosaic virus: an IC-RT-PCR approach. Eur J Plant Pathol. 2003;109(2):139–46.
Wyatt SD, Brown JK. Detection of subgroup III geminivirus isolates in leaf extracts by degenerate primers and polymerase chain reaction. Phytopathology. 1996;86(12):1288–93.
Xi D, Lan L, Wang J, Xu W, Xiang B, Lin H. Variation analysis of two cucumber mosaic viruses and their associated satellite RNAs from sugar beet in China. Virus Genes. 2016;33(3):293–8.
Londoño MA, Harmon CL, Polston JE. Evaluation of recombinase polymerase amplification for detection of begomoviruses by plant diagnostic clinics. Virol J. 2016;13(1):1–9.
Lu Y, Yao B, Wang G, Hong N. The detection of ACLSV and ASPV in pear plants by RT-LAMP assays. J Virol Methods. 2018;252:80–5.
Zhao L, Feng CH, Li BQ, Hao XA, Liu H, Wu YF, Wang QC. Rapid detection of apple stem grooving virus by reverse transcription loop-mediated isothermal amplification. J Plant Pathol. 2014;96(2):407–9.
Dai T, Yang X, Hu T, Jiao B, Xu Y, Zheng X, Shen D. Comparative evaluation of a novel recombinase polymerase amplification-lateral flow dipstick (RPA-LFD) assay, LAMP, conventional PCR, and leaf-disc baiting methods for detection of Phytophthora sojae. Front Microbiol. 2019;10:1884.
Hammond RW, Zhang S. Development of a rapid diagnostic assay for the detection of tomato chlorotic dwarf viroid based on isothermal reverse-transcription-recombinase polymerase amplification. J Virol Methods. 2016;236:62–7.
Cao Y, Yan D, Wu X, Chen Z, Lai Y, Lv L, Fei Y, Chen J, Zheng H, Song X. Rapid and visual detection of milk vetch dwarf virus using recombinase polymerase amplification combined with lateral flow strips. Virol J. 2020;17(1):1–8.
Kiatpathomchai W, Jaroenram W, Arunrut N, Jitrapakdee S, Flegel TW. Shrimp Taura syndrome virus detection by reverse transcription loop-mediated isothermal amplification combined with a lateral flow dipstick. J Virol Methods. 2008;153(2):214–7.
Wang H, Sun M, Xu D, Podok P, Xie J, Jiang Y, Lu L. Rapid visual detection of cyprinid herpesvirus 2 by recombinase polymerase amplification combined with a lateral flow dipstick. J Fish Dis. 2018;41(8):1201–6.
Bonney LC, Watson RJ, Afrough B, Mullojonova M, Dzhuraeva V, Tishkova F, Hewson R. A recombinase polymerase amplification assay for rapid detection of Crimean-Congo Haemorrhagic fever Virus infection. PLoS Negl Trop Dis. 2017;11(10):e0006013.
Miles, TD, Martin FN, Coffey MD. Development of rapid isothermal amplification assays for detection of Phytophthora spp. in plant tissue. Phytopathology. 2015;105:2, 265–78.
Cui L, Ge Y, Qi X, Xu G, Li H, Zhao K, Wu B, Shi Z, Guo X, Hu L, You Q, Zhang LH, Freiberg AN, Yu X, Wang H, Zhou M, Tang YW. Detection of severe fever with thrombocytopenia syndrome virus by reverse transcription–cross-priming amplification coupled with vertical flow visualization. J Clin Microbiol. 2012;50(12):3881–5.
Ge Y, Wu B, Qi X, Zhao K, Guo X, Zhu Y, Qi Y, Shi Z, Zhou M, Wang H, Cui L. Rapid and sensitive detection of novel avian-origin influenza A (H7N9) virus by reverse transcription loop-mediated isothermal amplification combined with a lateral-flow device. PLoS ONE. 2013;8(8):e69941.
Xi Y, Xu CZ, Xie ZZ, Zhu DL, Dong JM. Rapid and visual detection of dengue virus using recombinase polymerase amplification method combined with lateral flow dipstick. Mol Cell Probes. 2019;46:101413.
Adkins S, Webster CG, Mellinger HC, Frantz G, Turechek WW, McAvoy E, Funderburk JE. Detection and characterization of tomato viruses: a case study of emerging tospoviruses in Florida. In IV International Symposium on Tomato Diseases 2013;1069, 83–85. Available from. https://www.actahort.org/members/showpdf?session=1861926.